dosma.tissues.Meniscus¶

class dosma.tissues.Meniscus(weights_dir: Optional[str] = None, medial_to_lateral: Optional[bool] = None)[source]¶

Handles analysis and visualization for meniscus.

This class extends functionality from Tissue.

For visualization, the meniscus is unrolled across the axial plane.

__init__(weights_dir: Optional[str] = None, medial_to_lateral: Optional[bool] = None)[source]¶: Initialize self. See help(type(self)) for accurate signature.

Methods

`__init__`([weights_dir, medial_to_lateral])	Initialize self.
`add_quantitative_value`(qv_new)	Add quantitative value to the tissue.
`calc_quant_vals`()	Calculate quantitative values for pixels corresponding to the tissue.
`find_weights`(weights_dir)	Search for weights file in weights directory.
`get_mask`()	returns Binary mask of segmented tissue.
`load_data`(load_dir_path)	Load data for tissue.
`save_data`(save_dirpath[, data_format])	Save data for tissue.
`set_mask`(mask)	Set mask for tissue.
`split_regions`(base_map)	Split mask into anatomical regions.
`unroll_axial`(quant_map)	Unroll meniscus in axial direction.

Attributes