dosma.scan_sequences.Cones¶
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class
dosma.scan_sequences.Cones(dicom_path=None, load_path=None, **kwargs)[source]¶ UTE-Cones MRI sequence.
Ultra-short echo time cones (UTE-Cones) is a \(T_2^*\)-weighted sequence. In practice, many of these scans are low resolution and are ofter interregistered with higher-resolution scans. This can be done with
Cones.interregister().References
Qian Y, Williams AA, Chu CR, Boada FE. Multicomponent T2* mapping of knee cartilage: technical feasibility ex vivo. Magnetic resonance in medicine 2010;64(5):1426-1431.”
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__init__(dicom_path=None, load_path=None, **kwargs)[source]¶ Initialize self. See help(type(self)) for accurate signature.
Methods
__init__([dicom_path, load_path])Initialize self.
Provide command line information (such as name, help strings, etc) as list of dictionary.
generate_t2_star_map(tissue[, mask_path, …])Generate 3D :math:`T_2^* map and r-squared fit map using mono-exponential fit across subvolumes acquired at different echo times.
get_dimensions()Get shape of volumes.
interregister(target_path[, target_mask_path])Register this scan to the target scan - save as parameter in scan (volumes, subvolumes, etc).
load_data(base_load_dirpath)Load data from disk.
save_data(base_save_dirpath[, data_format])Save data to disk.
Attributes
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